Publications

GraphkmerDTA: integrating local sequence patterns and topological information for drug-target binding affinity prediction and applications in multi-target anti-Alzheimer’s drug discovery

Published in Molecular Diversity, 2025

Recommended citation: Zhang, Z., Luo, G., Ma, Y. et al. GraphkmerDTA: integrating local sequence patterns and topological information for drug-target binding affinity prediction and applications in multi-target anti-Alzheimer’s drug discovery. Mol Divers (2025). https://doi.org/10.1007/s11030-024-11065-7
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ComNet: A Multiview Deep Learning Model for Predicting Drug Combination Side Effects

Published in Journal of Chemical Information and Modeling, 2025

Recommended citation: Zhang, Z., Liu, F., Shang, X., Chen, S., Zuo, F., Wu, Y., & Long, D. (2025). ComNet: A Multiview Deep Learning Model for Predicting Drug Combination Side Effects. Journal of chemical information and modeling, 10.1021/acs.jcim.4c01737. Advance online publication. https://doi.org/10.1021/acs.jcim.4c01737
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Enhancing generalizability and performance in drug–target interaction identification by integrating pharmacophore and pre-trained models

Published in Bioinformatics, 2024

oral presentation in ISMB 2024

Recommended citation: Zuolong Zhang, Xin He, Dazhi Long, Gang Luo, Shengbo Chen, Enhancing generalizability and performance in drug–target interaction identification by integrating pharmacophore and pre-trained models, Bioinformatics, Volume 40, Issue Supplement_1, July 2024, Pages i539–i547, https://doi.org/10.1093/bioinformatics/btae240
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